Alternaria citri

Last updated

Alternaria citri
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Eukaryota
Kingdom: Fungi
Division: Ascomycota
Class: Dothideomycetes
Order: Pleosporales
Family: Pleosporaceae
Genus: Alternaria
Species:
A. citri
Binomial name
Alternaria citri
Ellis & N.Pierce

Alternaria citri is a fungal plant pathogen that causes black rot in citrus plants.

Contents

Host and symptoms

Alternaria citri is an ascomycete fungal plant pathogen that causes black rot in citrus plants. [1] Specifically, certain lemon, lime, orange, mandarin and grapefruit species are susceptible hosts for this pathogen. [2] [3] The host is more susceptible to disease in climates with dry, warm summers and cool, moist winters. One symptom of the pathogen is the black rot that is produced. The black hyphae that form on the surface of the plant is a sign of the actual pathogen. While healthy and uninfected fruits will display a particular hue, a plant infected by A. citri will possess atypical and usually more brightly colored fruits which signifies presence of the pathogen. [1]

Disease cycle

Little research on the specific disease cycle of Alernaria citri has been conducted because its life cycle is so similar to Alternaria alternata. The life cycle of Alternaria alternata can be used as a proxy for information on Alternaria citri. However, Alternaria citri does not produces external signs or symptoms on leaves and stems, like Alternaria alternata. Signs and symptoms of Alternaria citri do not develop until after the fruit is harvested.[ citation needed ]

Alternaria alternata has no known resting sexual stage. Instead, it overwinters in infected plant debris through asexual spores called conidia. [4] Their production can begin in as few as ten days after the first symptoms appear, and can continue for to up to fifty days. [5] Because of this, the life cycle is known as poly-cyclic. Alternaria alternata's conidia disperse via air currents, and their release from the lesions can be triggered by rainfall, or even just a sudden increase in humidity. [5] When the conidium lands on a leaf, it will wait until the nighttime dew, and then germinate. [4] It can either enter through the stomata, or penetrate directly through the top of the leaf, using its appressorium, infecting the leaf within 12 hours. [4]

Environment

In the orchard, Alternaria citri is more likely to contaminate overripe and damaged fruit. [6] The longer the fruit are stored, the more likely black rot will develop. [7] Alternaria citri is more likely to be found in hot, semi-arid areas compared to humid areas. [4] Prior experiments have shown that the pathogen can grow in a pH between 2.7 and 8.0 with 5.4 being the optimum. Alternaria citri can grow between 15 and 35 °C with 25 °C as the ideal temperature. [8]

Management

Since Alternaria citri mainly infects stressed and overripe fruit, one management practice is to prevent stress of the fruit. By keeping the fruit and plant healthy the navel is less likely to split and become infected.[1] One way to stop stress is to supply adequate amounts of plant macronutrients. To prevent over ripened fruit from getting infected, harvesting at optimum maturity is advised by clipping the fruit and not snapping it[2]. Snapping refers to the act of pulling the fruit and damaging the stalk end of the fruit. The exposed tissue of healthy fruits increased the chances of infection from diseased fruits by having a wound for the pathogen to enter. Because fungicides have proved to be unhelpful in stopping the infection of citrus fruits, the use of resistant plants have proven to be the most advantageous form of management. Resistant plants have been produced by breeding hybrid cultivars from existing resistant cultivars, irradiation, or gene modification. [8]

Importance

Alternaria citri can be found worldwide, in areas that store and produce citrus. [9] Without proper management, the disease can lead to huge losses for citrus growers. In 1901, 10 to 30% of citrus crops in California were lost due to Alternaria citri. Another source states that in India, between 1988 and 1990, more than 20% of mandarins in transport were lost to the disease. [10] In general, the pathogen is most commonly found in navel orange orchards as the "navel" of the orange allows for easier infection compared to other citrus fruits. [4] The pathogen can decrease fresh market quality and interfere with juice processing. [7] The disease can be a problem with juice companies as accidental processing of an infected fruit will leave pieces of black tissue in the juice, making the product unsellable. [7] Another complication with black rot is the potential delay in harvest time. [6] A common management practice is to let the infected fruits drop prematurely in order to prevent contamination of the healthy crop. However, this tactic may delay harvest beyond the optimal time for fruit maturity. [6]

Pathogenesis

Alternaria citri may infect a plant through wounds on the plant surface or through the end of the stem of the fruit at the location called a stylet where natural openings exist. [1] [11] Once the pathogen has entered a susceptible host, infection may begin. The infection route for the pathogen is limited to internal tissues during the growth period in the field and causes internal decay. [11] In turn, the internal decay causes the fruits to ripen and drop prematurely. [12] No external symptoms or signs are visible when the fruit is still attached at the stalk end during development and is completely intact without any disruption to the peel. [11] The observable signs and symptoms occur on the peel after they drop or are harvested. This occurs because the fruits become detached from the stalk end, providing an exit route for the infection to spread to the peel that it is no longer intact. [12] As the infection spreads further, the fruit becomes macerated, or softened, and black rot develops. [2]

A key enzyme produced by the pathogen known as endopolygalacturonase (endoPG) is highly influential in the success of the pathogen. EndoPG is an endogenous polygalacturonase, which is a cell wall degrading enzyme that helps the pathogen take over the plant's nutrient source. A. citri that lack the ability to produce endoPG due to mutation have limited success because they are unable to penetrate through the cell wall. [11]

Related Research Articles

<i>Phytophthora palmivora</i> Species of single-celled organism

Phytophthora palmivora is an oomycete that causes bud-rot of palms, fruit-rot or kole-roga of coconut and areca nut. These are among the most serious diseases caused by fungi and moulds in South India. It occurs almost every year in Malnad, Mysore, North & South Kanara, Malabar and other areas. Similar diseases of palms are also known to occur in Sri Lanka, Mauritius, and Sumatra. The causative organism was first identified as P. palmivora by Edwin John Butler in 1917.

Glomerella graminicola is an economically important crop parasite affecting both wheat and maize where it causes the plant disease Anthracnose Leaf Blight.

<i>Alternaria alternata</i> Pathogenic fungus

Alternaria alternata is a fungus causing leaf spots, rots, and blights on many plant parts, and other diseases. It is an opportunistic pathogen on over 380 host species of plant.

Mucor piriformis is a plant pathogen that causes a soft rot of several fruits known as Mucor rot. Infection of its host fruits, such as apples and pears, takes place post-harvest. The fungi can also infect citrus fruits.

<i>Penicillium expansum</i> Species of fungus

Penicillium expansum is a psychrophilic blue mold that is common throughout the world in soil. It causes Blue Mold of apples, one of the most prevalent and economically damaging post-harvest diseases of apples.

<i>Sclerotinia sclerotiorum</i> Species of fungus

Sclerotinia sclerotiorum is a plant pathogenic fungus and can cause a disease called white mold if conditions are conducive. S. sclerotiorum can also be known as cottony rot, watery soft rot, stem rot, drop, crown rot and blossom blight. A key characteristic of this pathogen is its ability to produce black resting structures known as sclerotia and white fuzzy growths of mycelium on the plant it infects. These sclerotia give rise to a fruiting body in the spring that produces spores in a sac which is why fungi in this class are called sac fungi (Ascomycota). This pathogen can occur on many continents and has a wide host range of plants. When S. sclerotiorum is onset in the field by favorable environmental conditions, losses can be great and control measures should be considered.

Ceratocystis paradoxa or Black Rot of Pineapple is a plant pathogen that is a fungus, part of the phylum Ascomycota. It is characterized as the teleomorph or sexual reproduction stage of infection. This stage contains ascocarps, or sacs/fruiting bodies, which contain the sexually produced inoculating ascospores. These are the structures which are used primarily to survive long periods of time or overwinter to prepare for the next growing season of its host. Unfortunately, the sexual stage is not often seen in the natural field but instead the anamorph, or asexual stage is more commonly seen. This asexual stage name is Thielaviopsis paradoxa and is the common cause of Black rot or stem-end rot of its hosts.

<i>Alternaria solani</i> Species of fungus

Alternaria solani is a fungal pathogen that produces a disease in tomato and potato plants called early blight. The pathogen produces distinctive "bullseye" patterned leaf spots and can also cause stem lesions and fruit rot on tomato and tuber blight on potato. Despite the name "early," foliar symptoms usually occur on older leaves. If uncontrolled, early blight can cause significant yield reductions. Primary methods of controlling this disease include preventing long periods of wetness on leaf surfaces and applying fungicides. Early blight can also be caused by Alternaria tomatophila, which is more virulent on stems and leaves of tomato plants than Alternaria solani.

<i>Penicillium funiculosum</i> Species of fungus

Penicillium funiculosum is a plant pathogen infecting pineapples.

<i>Glomerella cingulata</i> Species of fungus

Glomerella cingulata is a fungal plant pathogen, being the name of the sexual stage (teleomorph) while the more commonly referred to asexual stage (anamorph) is called Colletotrichum gloeosporioides. For most of this article the pathogen will be referred to as C. gloeosporioides. This pathogen is a significant problem worldwide, causing anthracnose and fruit rotting diseases on hundreds of economically important hosts.

This article summarizes different crops, what common fungal problems they have, and how fungicide should be used in order to mitigate damage and crop loss. This page also covers how specific fungal infections affect crops present in the United States.

<i>Monilinia oxycocci</i> Species of fungus

Monilinia oxycocci (Woronin) Honey,, common names cranberry cottonball, cranberry hard rot, tip blight, is a fungal infection of large cranberry and small cranberry. The tips of young flowering shoots wilt before they flower. Fruit that forms on the plant can then be infected by the asexual spores traveling through the plant, causing the berries to harden, turn cottony on the inside, and dry out instead of maturing. The berries are filled with a cotton-like fungus and are generally yellowish with tan stripes or blotches at maturity, making them unmarketable. It results in important economic impacts on many cranberry marshes, particularly in Wisconsin.

The Citrus stubborn disease is a plant disease affecting species in the genus Citrus. Spiroplasma citri, a Mollicute bacterium species, is the causative agent of the disease. It is present in the phloem of the affected plant. Originally discovered transmitted by several leafhoppers including Circulifer tenellus and Scaphytopius nitridus in citrus-growing regions of California, it is now spread by the same hoppers in Arizona and Circulifer haematoceps in the Mediterranean region.

<span class="mw-page-title-main">Beet vascular necrosis</span> Bacterial disease in beet plants

Beet vascular necrosis and rot is a soft rot disease caused by the bacterium Pectobacterium carotovorum subsp. betavasculorum, which has also been known as Pectobacterium betavasculorum and Erwinia carotovora subsp. betavasculorum. It was classified in the genus Erwinia until genetic evidence suggested that it belongs to its own group; however, the name Erwinia is still in use. As such, the disease is sometimes called Erwinia rot today. It is a very destructive disease that has been reported across the United States as well as in Egypt. Symptoms include wilting and black streaks on the leaves and petioles. It is usually not fatal to the plant, but in severe cases the beets will become hollowed and unmarketable. The bacteria is a generalist species which rots beets and other plants by secreting digestive enzymes that break down the cell wall and parenchyma tissues. The bacteria thrive in warm and wet conditions, but cannot survive long in fallow soil. However, it is able to persist for long periods of time in the rhizosphere of weeds and non-host crops. While it is difficult to eradicate, there are cultural practices that can be used to control the spread of the disease, such as avoiding injury to the plants and reducing or eliminating application of nitrogen fertilizer.

Peach scab, also known as peach freckles, is a disease of stone fruits caused by the fungi Cladosporium carpophilum. The disease is most prevalent in wet and warm areas especially southern part of the U.S. as the fungi require rain and wind for dispersal. The fungus causes scabbing, lesions, and defoliating on twig, fruit, and leaf resulting in downgrade of peach quality or loss of fruits due to rotting in severe cases.

Gummy stem blight is a cucurbit-rot disease caused by the fungal plant pathogen Didymella bryoniae. Gummy stem blight can affect a host at any stage of growth in its development and affects all parts of the host including leaves, stems and fruits. Symptoms generally consist of circular dark tan lesions that blight the leaf, water soaked leaves, stem cankers, and gummy brown ooze that exudes from cankers, giving it the name gummy stem blight. Gummy stem blight reduces yields of edible cucurbits by devastating the vines and leaves and rotting the fruits. There are various methods to control gummy stem blight, including use of treated seed, crop rotation, using preventative fungicides, eradication of diseased material, and deep plowing previous debris.

<i>Penicillium digitatum</i> Species of fungus

Penicillium digitatum is a mesophilic fungus found in the soil of citrus-producing areas. It is a major source of post-harvest decay in fruits and is responsible for the widespread post-harvest disease in Citrus fruit known as green rot or green mould. In nature, this necrotrophic wound pathogen grows in filaments and reproduces asexually through the production of conidiophores and conidia. However, P. digitatum can also be cultivated in the laboratory setting. Alongside its pathogenic life cycle, P. digitatum is also involved in other human, animal and plant interactions and is currently being used in the production of immunologically based mycological detection assays for the food industry.

<span class="mw-page-title-main">Alternaria leaf spot</span> Fungal plant disease

Alternaria leaf spot or Alternaria leaf blight are a group of fungal diseases in plants, that have a variety of hosts. The diseases infects common garden plants, such as cabbage, and are caused by several closely related species of fungi. Some of these fungal species target specific plants, while others have been known to target plant families. One commercially relevant plant genus that can be affected by Alternaria Leaf Spot is Brassica, as the cosmetic issues caused by symptomatic lesions can lead to rejection of crops by distributors and buyers. When certain crops such as cauliflower and broccoli are infected, the heads deteriorate and there is a complete loss of marketability. Secondary soft-rotting organisms can infect stored cabbage that has been affected by Alternaria Leaf Spot by entering through symptomatic lesions. Alternaria Leaf Spot diseases that affect Brassica species are caused by the pathogens Alternaria brassicae and Alternaria brassicicola.

Cranberry fruit rot (CFR) is a disease complex of multiple fungal agents affecting the American cranberry. Cranberry fruit rot can be categorized into field rot and storage rot. The importance of field rot and fruit rot depends on how the cranberries will be processed after harvest. If cranberries are immediately processed after harvest, growers focus on preventing field rot while with fresh market cranberries, growers seek to prevent storage rot. There are 10-15 fungal pathogens known to cause cranberry fruit rot diseases, some active in only field rot, storage rot, or both. The majority of these fungal pathogens are ascomycetes, with the rest being deuteromycetes. There is no known bacterial pathogen that plays a role in CFR or any major disease on cranberry, potentially due to the low pH conditions on the cranberry fruit.

References

  1. 1 2 3 Peever, T.L. (2005). "Citrus Black Rot Is Caused by Phylogenetically Distinct Lineages of Alternaria Alternata". Phytopathology. 95 (5): 512–18. doi: 10.1094/phyto-95-0512 . PMID   18943316.
  2. 1 2 Katoh, H. (2006). "Virulence-Reducing Mutation in the Postharvest Citrus Pathogen Alternaria Citri". Phytopathology. 96 (4): 934–40. doi: 10.1094/phyto-96-0934 . PMID   18944048.
  3. Gardner, J. (1986). "Bioassay and Host-selectivity of Alternaria Citri Toxins Affecting Rough Lemon and Mandarins". Physiological and Molecular Plant Pathology. 29 (3): 293–304. doi:10.1016/S0048-4059(86)80046-7.
  4. 1 2 3 4 5 Timmer, Lavern. M.; Tobin, L. Peever; Solel, Zvi; Akimitsu, Kazuya (2003). "Alternaria Diseases of Citrus - Novel Pathosystems". Phytopathology Mediterranea: 99–112.
  5. 1 2 Dewdney, M. M. "Alternaria Brown Spot". EDIS. University of Florida. Archived from the original on 15 August 2020. Retrieved 22 October 2015.
  6. 1 2 3 "Citrus: Alternaria Rot". UC IPM: UC Management Guidelines for Alternaria Rot on Citrus. Retrieved 21 October 2015.
  7. 1 2 3 Timmer, L. W.; Garnsey, S. M.; Graham, J. H., eds. (2000). "Postharvest Fungal Diseases: Alternaria Rot.". Compendium of Citrus Diseases (2nd ed.). St. Paul: American Phytopathological Society. p. 37.
  8. 1 2 Hasija, S. K. (1970). "Physiological Studies of Alternaria citri and A. tenuis". Mycologia. 2nd ser. 62 (2): 289–95. doi:10.2307/3757587. JSTOR   3757587.
  9. "Stalk End Rot (Alternaria Citri)". Plantwise. Retrieved 21 October 2015.
  10. Bliss, Donald E.; Fawcett, H. S. (1944). "The Morphology and Taxonomy of Alternaria Citri". Mycologia. 5th ser. 36 (5): 469–502. doi:10.2307/3754954. JSTOR   3754954.
  11. 1 2 3 4 Isshiki, A. (2003). "Green Fluorescent Detection of Fungal Colonization and Endopolygalacturonase Gene Expression in the Interaction of Alternaria Citri with Citrus". Phytopathology. 93 (7): 768–73. doi: 10.1094/phyto.2003.93.7.768 . PMID   18943156.
  12. 1 2 "Stalk End Rot (Alternaria Citri)." Plantwise Knowledge Bank. N.p., n.d. Web. 3 Dec. 2015