Aeropyrum pernix

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Aeropyrum pernix
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Archaea
Kingdom: Proteoarchaeota
Superphylum: TACK group
Phylum: Thermoproteota
Class: Thermoprotei
Order: Desulfurococcales
Family: Desulfurococcaceae
Genus: Aeropyrum
Species:
A. pernix
Binomial name
Aeropyrum pernix
Sako et al. 1996

Aeropyrum pernix is a species of extremophile archaea in the archaeal phylum Thermoproteota. It is an obligatorily thermophilic species. The first specimens were isolated from sediments in the sea off the coast of Japan.

Contents

Discovery

Aeropyrum pernix was the first strictly aerobic hyperthermophilic Archaea to be discovered. It was originally isolated from heated marine sediments and venting water collected in 1996 from a solfataric vent at Kodakara-jima island in Kyūshū, Japan. [1]

Genome structure

Its complete genome was sequenced in 1999 and is 1,669 kilobases in size, with 2,694 possible genes detected. [2] All of the genes in the TCA cycle were found except for that of α-ketoglutarate dehydrogenase. In its place, the genes coding for the two subunits of 2-oxoacid:ferredoxin oxidoreductase were identified.

Properties

The cells of Aeropyrum pernix are spherical in shape and approximately 1 μm in diameter. The envelope surrounding the cells of Aeropyrum is about 25 nm wide. The organisms grows at temperature between 70 and 100 °C (optimum, 90 to 95 °C), at pH 5 to 9 (optimum, pH 7), and at a salinity of 1.8 to 7% (optimum, 3.5% salinity). The growth of the organisms is not detected at 68 or 102 °C. Below 1.5% salinity, cells lyse by low osmotic shock. The cells of the organisms are sensitive to chloramphenicol and insensitive to ampicillin, vancomycin, and cycloserine. It grows well on proteinaceous substances, with a doubling time under these conditions of about 200 minutes. [1] This species lacks the genes for purine nucleotide biosynthesis and thus relies on environmental sources to meet its purine requirements. [3]

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Sulfolobus metallicus is a coccoid shaped thermophilic archaeon. It is a strict chemolithoautotroph gaining energy by oxidation of sulphur and sulphidic ores into sulfuric acid. Its type strain is Kra 23. It has many uses that take advantage of its ability to grow on metal media under acidic and hot environments.

Saccharolobus solfataricus is a species of thermophilic archaeon. It was transferred from the genus Sulfolobus to the new genus Saccharolobus with the description of Saccharolobus caldissimus in 2018.

Spiraviridae is a family of incertae sedis viruses that replicate in hyperthermophilic archaea of the genus Aeropyrum, specifically Aeropyrum pernix. The family contains one genus, Alphaspiravirus, which contains one species, Aeropyrum coil-shaped virus. The virions of ACV are non-enveloped and in the shape of hollow cylinders that are formed by a coiling fiber that consists of two intertwining halves of the circular DNA strand inside a capsid. An appendage protrudes from each end of the cylindrical virion. The viral genome is ssDNA(+) and encodes for significantly more genes than other known ssDNA viruses. ACV is also unique in that it appears to lack its own enzymes to aid replication, instead likely using the host cell's replisomes. ACV has no known relation to any other archaea-infecting viruses, but it does share its coil-like morphology with some other archaeal viruses, suggesting that such viruses may be an ancient lineage that only infect archaea.

Acidilobus saccharovorans is a thermoacidophilic species of anaerobic archaea. The species was originally described in 2009 after being isolated from hot springs in Kamchatka.

References

  1. 1 2 Sako Y, Nomura N, Uchida A, et al. (1996). "Aeropyrum pernix gen. nov., sp. nov., a novel aerobic hyperthermophilic archaeon growing at temperatures up to 100 degrees C". Int. J. Syst. Bacteriol. 46 (4): 1070–7. doi: 10.1099/00207713-46-4-1070 . PMID   8863437.
  2. Kawarabayasi Y, Hino Y, Horikawa H, et al. (1999). "Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1". DNA Res. 6 (2): 83–101, 145–52. doi: 10.1093/dnares/6.2.83 . PMID   10382966.
  3. Brown, Anne M; Hoopes, Samantha L; White, Robert H; Sarisky, Catherine A (2011-12-14). "Purine biosynthesis in archaea: variations on a theme". Biology Direct. 6: 63. doi: 10.1186/1745-6150-6-63 . ISSN   1745-6150. PMC   3261824 . PMID   22168471.

Further reading