Cathepsin F

Last updated
CTSF
Protein CTSF PDB 1m6d.png
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases CTSF , CATSF, CLN13, cathepsin F
External IDs OMIM: 603539 MGI: 1861434 HomoloGene: 31194 GeneCards: CTSF
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_003793

NM_019861

RefSeq (protein)

NP_003784

NP_063914

Location (UCSC) Chr 11: 66.56 – 66.57 Mb Chr 19: 4.91 – 4.91 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Cathepsin F is a protein that in humans is encoded by the CTSF gene. [5] [6] [7]

Contents

Cysteine cathepsins are a family of cysteine proteases that represent a major component of the lysosomal proteolytic system. In general, cathepsins contain a signal peptide, followed by a propeptide and then a catalytically active mature region. The very long (251-amino acid residues) proregion of the cathepsin F precursor contains a C-terminal domain similar to the pro-segment of Cathepsin L-like enzymes, a 50-residue flexible linker peptide, and an N-terminal domain predicted to adopt a cystatin-like fold. The cathepsin F proregion is unique within the papain family cysteine proteases in that it contains this additional N-terminal segment predicted to share structural similarities with cysteine protease inhibitors of the cystatin superfamily. This cystatin-like domain contains some of the elements known to be important for inhibitory activity. CTSF encodes a predicted protein of 484 amino acids that contains a 19-residue signal peptide. Cathepsin F contains five potential N-glycosylation sites, and it may be targeted to the endosomal/lysosomal compartment via the mannose 6-phosphate receptor pathway. The cathepsin F gene is ubiquitously expressed, and it maps to chromosome 11q13, close to the gene encoding cathepsin W. [7]

In non-human species

Immunodiagnosis of Opisthorchis viverrini

Opisthorchis viverrini , a parasite, is typically detected by stool examination, specifically by counting eggs. However, this non-invasive, "gold standard" method can be unreliable in light infection and labor-intensive. An ELISA assay that detects the presense of the parasite's cathepsin F protein may be used as an alternative way to test for the parasite's presence. [8]

Discovery in Yesso scallop (Mizuhopecten yessoensis)

The Yesso scallop ( Mizuhopecten yessoensis ), was found in 2018 to express Cathepsin F in response to bacterial infection. The Yesso scallop has been suffering from high mortality due to bacterial diseases. Understanding the workings of its innate immune system, in various embryonic developmental stages, may help the associated aquaculture industry. [9]

Related Research Articles

<span class="mw-page-title-main">Cathepsin</span> Family of proteases

Cathepsins are proteases found in all animals as well as other organisms. There are approximately a dozen members of this family, which are distinguished by their structure, catalytic mechanism, and which proteins they cleave. Most of the members become activated at the low pH found in lysosomes. Thus, the activity of this family lies almost entirely within those organelles. There are, however, exceptions such as cathepsin K, which works extracellularly after secretion by osteoclasts in bone resorption. Cathepsins have a vital role in mammalian cellular turnover.

<span class="mw-page-title-main">Cathepsin S</span> Protein-coding gene in the species Homo sapiens

Cathepsin S is a protein that in humans is encoded by the CTSS gene. Transcript variants utilizing alternative polyadenylation signals exist for this gene.

<span class="mw-page-title-main">Cathepsin O</span> Protein-coding gene in the species Homo sapiens

Cathepsin O is an enzyme that in humans is encoded by the CTSO gene.

<span class="mw-page-title-main">Cathepsin B</span> Protein-coding gene in the species Homo sapiens

Cathepsin B belongs to a family of lysosomal cysteine proteases known as the cysteine cathepsins and plays an important role in intracellular proteolysis. In humans, cathepsin B is encoded by the CTSB gene. Cathepsin B is upregulated in certain cancers, in pre-malignant lesions, and in various other pathological conditions.

<span class="mw-page-title-main">Cathepsin D</span> Protein-coding gene in the species Homo sapiens

Cathepsin D is a protein that in humans is encoded by the CTSD gene. This gene encodes a lysosomal aspartyl protease composed of a protein dimer of disulfide-linked heavy and light chains, both produced from a single protein precursor. Cathepsin D is an aspartic endo-protease that is ubiquitously distributed in lysosomes. The main function of cathepsin D is to degrade proteins and activate precursors of bioactive proteins in pre-lysosomal compartments. This proteinase, which is a member of the peptidase A1 family, has a specificity similar to but narrower than that of pepsin A. Transcription of the CTSD gene is initiated from several sites, including one that is a start site for an estrogen-regulated transcript. Mutations in this gene are involved in the pathogenesis of several diseases, including breast cancer and possibly Alzheimer disease. Homozygous deletion of the CTSD gene leads to early lethality in the postnatal phase. Deficiency of CTSD gene has been reported an underlying cause of neuronal ceroid lipofuscinosis (NCL).

<span class="mw-page-title-main">Cathepsin L1</span> Protein-coding gene in the species Homo sapiens

Cathepsin L1 is a protein that in humans is encoded by the CTSL1 gene. The protein is a cysteine cathepsin, a lysosomal cysteine protease that plays a major role in intracellular protein catabolism.

<span class="mw-page-title-main">Cystatin A</span> Protein-coding gene in the species Homo sapiens

Cystatin-A is a protein that in humans is encoded by the CSTA gene.

<span class="mw-page-title-main">Cystatin B</span> Protein-coding gene in the species Homo sapiens

Cystatin-B is a protein that in humans is encoded by the CSTB gene.

<span class="mw-page-title-main">Cathepsin H</span> Protein-coding gene in the species Homo sapiens

Cathepsin H is a protein that in humans is encoded by the CTSH gene.

<span class="mw-page-title-main">CST1</span> Protein-coding gene in the species Homo sapiens

Cystatin-SN is a protein that in humans is encoded by the CST1 gene.

<span class="mw-page-title-main">CST2</span> Protein-coding gene in the species Homo sapiens

Cystatin-SA is a protein that in humans is encoded by the CST2 gene.

<span class="mw-page-title-main">CST6 (gene)</span> Protein-coding gene in the species Homo sapiens

Cystatin-M is a protein that in humans is encoded by the CST6 gene.

<span class="mw-page-title-main">CST7 (gene)</span> Protein-coding gene in the species Homo sapiens

Cystatin-F is a protein that in humans is encoded by the CST7 gene.

<span class="mw-page-title-main">CST5</span> Protein-coding gene in the species Homo sapiens

Cystatin-D is a protein that in humans is encoded by the CST5 gene.

<span class="mw-page-title-main">Cathepsin Z</span> Protein-coding gene in the species Homo sapiens

Cathepsin Z, also called cathepsin X or cathepsin P, is a protein that in humans is encoded by the CTSZ gene. It is a member of the cysteine cathepsin family of cysteine proteases, which has 11 members. As one of the 11 cathepsins, cathepsin Z contains distinctive features from others. Cathepsin Z has been reported involved in cancer malignancy and inflammation.

<span class="mw-page-title-main">Cathepsin L2</span> Protein-coding gene in the species Homo sapiens

Cathepsin L2 is a protein encoded in humans by the CTSV gene.

<span class="mw-page-title-main">Cathepsin W</span> Protein-coding gene in the species Homo sapiens

Cathepsin W is a protein that in humans is encoded by the CTSW gene.

<span class="mw-page-title-main">TINAGL1</span> Protein-coding gene in the species Homo sapiens

Tubulointerstitial nephritis antigen-like is a protein that in humans is encoded by the TINAGL1 gene.

<span class="mw-page-title-main">CST9L</span> Protein-coding gene in the species Homo sapiens

Cystatin-9-like is a protein that in humans is encoded by the CST9L gene.

<span class="mw-page-title-main">Papain-like protease</span>

Papain-like proteases are a large protein family of cysteine protease enzymes that share structural and enzymatic properties with the group's namesake member, papain. They are found in all domains of life. In animals, the group is often known as cysteine cathepsins or, in older literature, lysosomal peptidases. In the MEROPS protease enzyme classification system, papain-like proteases form Clan CA. Papain-like proteases share a common catalytic dyad active site featuring a cysteine amino acid residue that acts as a nucleophile.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000174080 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000083282 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Wang B, Shi GP, Yao PM, Li Z, Chapman HA, Bromme D (Dec 1998). "Human cathepsin F. Molecular cloning, functional expression, tissue localization, and enzymatic characterization". J Biol Chem. 273 (48): 32000–8. doi: 10.1074/jbc.273.48.32000 . PMID   9822672.
  6. Santamaria I, Velasco G, Pendas AM, Paz A, Lopez-Otin C (Jun 1999). "Molecular cloning and structural and functional characterization of human cathepsin F, a new cysteine proteinase of the papain family with a long propeptide domain". J Biol Chem. 274 (20): 13800–9. doi: 10.1074/jbc.274.20.13800 . PMID   10318784.
  7. 1 2 "Entrez Gene: CTSF cathepsin F".
  8. Teimoori, Salma; Arimatsu, Yuji; Laha, Thewarach; Kaewkes, Sasithorn; Sereerak, Piya; Tangkawattana, Sirikachorn; Brindley, Paul J; Sripa, Banchob (December 2015). "Immunodiagnosis of opisthorchiasis using parasite cathepsin F". Parasitology Research. 114 (12): 4571–4578. doi:10.1007/s00436-015-4703-9. ISSN   0932-0113. PMC   4917378 . PMID   26344868.
  9. Guo, Haobing; Li, Yangping; Zhang, Meiwei; Li, Ruojiao; Li, Wanru; Lou, Jiarun; Bao, Zhenmin; Wang, Yangfan (September 2018). "Expression of Cathepsin F in response to bacterial challenges in Yesso scallop Patinopecten yessoensis". Fish & Shellfish Immunology. 80: 141–147. doi:10.1016/j.fsi.2018.06.005. PMID   29879509. S2CID   47014597.

Further reading