Coprothermobacter

Last updated

Coprothermobacter
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Coprothermobacterota
Class: Coprothermobacteria
Order: Coprothermobacterales
Family: Coprothermobacteraceae
Genus: Coprothermobacter
Rainey and Stackebrandt 1993
Type species
Coprothermobacter proteolyticus
(Ollivier et al. 1985) Rainey and Stackebrandt 1993
Species

Coprothermobacter is a genus of rod-shaped microorganisms, belonging to the bacterial family Coprothermobacteraceae of the phylum Coprothermobacterota . [1] This taxonomic genus has been reclassified in 2018, after different phylogenetic studies showed that these bacteria represented a deeply branched taxon of the domain Bacteria ; [2] consequently, the clade including this genus has been classified in a separate phylum from Firmicutes, the phylum where it was included before reclassification.

According to the first description of this genus, the etymology of its name derives from Greek words "kopros", meaning dung, from the source where one of the species ( Coprothermobacter proteolyticus ) was isolated, [3] and "thermos", meaning hot, warm, because of the relatively high temperatures at which these bacteria are able to grow, which can be as high as 75°C. [4]

Actually, very few known bacterial species are included in this genus, which are characterized by sharing genetic information with microorganisms belonging to Archaea , a taxonomic domain separate from the domain Bacteria . For this reason, Coprothermobacteria are considered a diverging lineage of bacteria.

Among the species included in this genus, Coprothermobacter platensis [5] and Coprothermobacter proteolyticus (formerly named Thermobacteroides proteolyticus) [3] are the only strains with validly published names. [6] [7]

See also

Related Research Articles

<span class="mw-page-title-main">Sulfur-reducing bacteria</span> Microorganisms able to reduce elemental sulfur to hydrogen sulfide

Sulfur-reducing bacteria are microorganisms able to reduce elemental sulfur (S0) to hydrogen sulfide (H2S). These microbes use inorganic sulfur compounds as electron acceptors to sustain several activities such as respiration, conserving energy and growth, in absence of oxygen. The final product of these processes, sulfide, has a considerable influence on the chemistry of the environment and, in addition, is used as electron donor for a large variety of microbial metabolisms. Several types of bacteria and many non-methanogenic archaea can reduce sulfur. Microbial sulfur reduction was already shown in early studies, which highlighted the first proof of S0 reduction in a vibrioid bacterium from mud, with sulfur as electron acceptor and H
2
as electron donor. The first pure cultured species of sulfur-reducing bacteria, Desulfuromonas acetoxidans, was discovered in 1976 and described by Pfennig Norbert and Biebel Hanno as an anaerobic sulfur-reducing and acetate-oxidizing bacterium, not able to reduce sulfate. Only few taxa are true sulfur-reducing bacteria, using sulfur reduction as the only or main catabolic reaction. Normally, they couple this reaction with the oxidation of acetate, succinate or other organic compounds. In general, sulfate-reducing bacteria are able to use both sulfate and elemental sulfur as electron acceptors. Thanks to its abundancy and thermodynamic stability, sulfate is the most studied electron acceptor for anaerobic respiration that involves sulfur compounds. Elemental sulfur, however, is very abundant and important, especially in deep-sea hydrothermal vents, hot springs and other extreme environments, making its isolation more difficult. Some bacteria – such as Proteus, Campylobacter, Pseudomonas and Salmonella – have the ability to reduce sulfur, but can also use oxygen and other terminal electron acceptors.

Enterocloster clostridioformis, formerly known as Clostridium clostridioforme, is an anaerobic, motile, Gram-positive bacterium.

Thermoanaerobacter is a genus in the phylum Bacillota (Bacteria). Members of this genus are thermophilic and anaerobic, several of them were previously described as Clostridium species and members of the now obsolete genera Acetogenium and Thermobacteroides

The family Thermodesulfobiaceae according to the LPSN is located within the order Thermoanaerobacterales and class Clostridia. However, according to the All-Species Living Tree Project it lies outside the clade Bacillota and the genus Caldanaerovirga does not belong to the clade, i.e. Thermodesulfobiaceae is polyphyletic.

Thermoanaerobacter acetoethylicus, formerly called Thermobacteroides acetoethylicus, is a species of thermophilic, nonspore-forming bacteria.

Coprothermobacter proteolyticus, formerly Thermobacteroides proteolyticus, is a thermophilic, non-spore-forming bacteria.

Gemmiger formicilis is a bacterium from the genus Gemmiger. It was initially assigned to the "Pseudomonadota", however 16S rRNA sequencing has led to its reclassification in the Bacillota.

Desulfomonile is a Gram negative, strict anaerobe and non-motile bacterial genus from the family of Syntrophaceae. Desulfomonile bacteria can reduce sulfur oxyanions to H2S.

Anaeromusa is a Gram-negative and obligately anaerobic bacterial genus from the family of Sporomusaceae, with one known species.

Catenibacterium is a Gram-positive, non-spore-forming and anaerobic genus from the family Erysipelotrichidae, with one known species.

Desulfofaba is a Gram-negative, anaerobic, non-spore-forming and motile bacteria genus from the family of Desulfobacteraceae.

Caldanaerobacter is a Gram-positive or negative and strictly anaerobic genus of bacteria from the family of Thermoanaerobacteraceae.

Oribacterium is a strictly anaerobic and non-spore-forming bacterial genus from the family of Lachnospiraceae.

Garciella is a Gram-positive, halotolerant, obligately anaerobic and moderately thermophilic bacterial genus from the family of Eubacteriaceae with one known species.

Mogibacterium is a Gram-positive, strictly anaerobic and non-spore-forming bacterial genus from the family of Eubacteriaceae.

Coprothermobacterota is a phylum of nonmotile, rod-shaped bacteria.

Coprothermobacteria is a taxonomic class of bacteria in the phylum Coprothermobacterota.

Coprothermobacterales is a taxonomic order of thermophilic bacteria in the class Coprothermobacteria of the phylum Coprothermobacterota.

Coprothermobacteraceae is a bacterial family of rod-shaped microorganisms, belonging to the order Coprothermobacterales, class Coprothermobacteria of the phylum Coprothermobacterota.

Coprothermobacter platensis is a species of moderately thermophilic and strictly anaerobic bacterium belonging to the family Coprothermobacteraceae within the phylum Coprothermobacterota.

References

  1. Pavan, María Elisa; Pavan, Esteban E.; Glaeser, Stefanie P.; Etchebehere, Claudia; Kämpfer, Peter; Pettinari, María Julia; López, Nancy I. (2018). "Proposal for a new classification of a deep branching bacterial phylogenetic lineage: transfer of Coprothermobacter proteolyticus and Coprothermobacter platensis to Coprothermobacteraceae fam. nov., within Coprothermobacterales ord. nov., Coprothermobacteria classis nov. and Coprothermobacterota phyl. nov. and emended description of the family Thermodesulfobiaceae". International Journal of Systematic and Evolutionary Microbiology. 68 (5): 1627–1632. doi: 10.1099/ijsem.0.002720 . hdl: 11336/93872 . PMID   29595416.
  2. Pavan, María E.; Pavan, Esteban E.; Kämpfer, Peter; Pettinari, M. Julia; López, Nancy I. (2019-06-27), "Coprothermobacter", Bergey's Manual of Systematics of Archaea and Bacteria, John Wiley & Sons, Ltd, pp. 1–11, doi:10.1002/9781118960608.gbm00752.pub2, ISBN   9781118960608
  3. 1 2 Rainey, Fred A.; Stackebrandt, Erko (1993). "Transfer of the Type Species of the Genus Thermobacteroides to the Genus Thermoanaerobacter as Thermoanaerobacter acetoethylicus(Ben-Bassat and Zeikus 1981) comb. nov., Description of Coprothermobacter gen. nov., and Reclassification of Thermobacteroides proteolyticus as Coprothermobacter proteolyticus(Ollivier et al. 1985) comb. nov". International Journal of Systematic and Evolutionary Microbiology. 43 (4): 857–859. doi: 10.1099/00207713-43-4-857 .
  4. Ollivier, Bernard M.; Mah, Robert A.; Ferguson, Thomas J.; Boone, David R.; Garcia, J. L.; Robinson, Ralph (1985). "Emendation of the Genus Thermobacteroides: Thermobacteroides proteolyticus sp. nov., a Proteolytic Acetogen from a Methanogenic Enrichment" (PDF). International Journal of Systematic and Evolutionary Microbiology. 35 (4): 425–428. doi: 10.1099/00207713-35-4-425 .
  5. Etchebehere, C.; Pavan, M. E.; Zorzópulos, J.; Soubes, M.; Muxi, L. (1998). "Coprothermobacter platensis sp. nov., a new anaerobic proteolytic thermophilic bacterium isolated from an anaerobic mesophilic sludge". International Journal of Systematic and Evolutionary Microbiology. 48 (4): 1297–1304. doi: 10.1099/00207713-48-4-1297 . PMID   9828430.
  6. Parte, A.C. "Coprothermobacter platensis". LPSN . Retrieved 2018-11-11.
  7. Parte, A.C. "Coprothermobacter proteolyticus". LPSN . Retrieved 2018-11-11.