A flagellate is a cell or organism with one or more whip-like appendages called flagella. The word flagellate also describes a particular construction characteristic of many prokaryotes and eukaryotes and their means of motion. The term presently does not imply any specific relationship or classification of the organisms that possess flagella. However, the term "flagellate" is included in other terms which are more formally characterized.
Zooplankton are the animal component of the planktonic community. Plankton are aquatic organisms that are unable to swim effectively against currents, and consequently drift or are carried along by currents in the ocean, or by currents in seas, lakes or rivers.
The dinoflagellates are a monophyletic group of single-celled eukaryotes constituting the phylum Dinoflagellata and are usually considered algae. Dinoflagellates are mostly marine plankton, but they also are common in freshwater habitats. Their populations vary with sea surface temperature, salinity, and depth. Many dinoflagellates are photosynthetic, but a large fraction of these are in fact mixotrophic, combining photosynthesis with ingestion of prey.
The alveolates are a group of protists, considered a major clade and superphylum within Eukarya. They are currently grouped with the stramenopiles and Rhizaria among the protists with tubulocristate mitochondria, the group being referred to as SAR.
Copepods are a group of small crustaceans found in nearly every freshwater and saltwater habitat. Some species are planktonic, some are benthic, a number of species have parasitic phases, and some continental species may live in limnoterrestrial habitats and other wet terrestrial places, such as swamps, under leaf fall in wet forests, bogs, springs, ephemeral ponds, and puddles, damp moss, or water-filled recesses (phytotelmata) of plants such as bromeliads and pitcher plants. Many live underground in marine and freshwater caves, sinkholes, or stream beds. Copepods are sometimes used as biodiversity indicators.
Perkinsus marinus is a species of alveolates belonging to the phylum Perkinsozoa. It is similar to a dinoflagellate. It is known as a prevalent pathogen of oysters, causing massive mortality in oyster populations. The disease it causes is known as dermo or perkinsosis, and is characterized by the degradation of oyster tissues. The genome of this species has been sequenced.
The Syndiniales are an order of early branching dinoflagellates, found as parasites of crustaceans, fish, algae, cnidarians, and protists. The trophic form is often multinucleate, and ultimately divides to form motile spores, which have two flagella in typical dinoflagellate arrangement. They lack a theca and chloroplasts, and unlike all other orders, the nucleus is never a dinokaryon. A well-studied example is Amoebophrya, which is a parasite of other dinoflagellates and may play a part in ending red tides. Several MALV groups have been assigned to Syndiniales; recent studies, however, show paraphyly of MALVs suggesting that only those groups that branch as sister to dinokaryotes belong to Syndiniales.
Colpodella is a genus of alveolates comprising 5 species, and two further possible species: They share all the synapomorphies of apicomplexans, but are free-living, rather than parasitic. Many members of this genus were previously assigned to a different genus - Spiromonas.
The genus Labyrinthula is part of the protist group Labyrinthulomycetes and contains thirteen species. The major feature of this genus is the formation of an ectoplasmic net secreted by specialized organelles called bothrosomes which surrounds the colony, which is also used by Labyrinthula for moving. The protist reproduces by zoosporulation as it sets some flagellated spores free from a sporangium. Zoospores prove the belonging of Labyrinthula in the Heterokont phylum due to the distinct flagellar morphology, in which the anterior one is covered in mastigonemes.
Katabia is a genus of soil-dwelling heterotrophic flagellate cercozoans containing the single species Katabia gromovi, and the only member of family Katabiidae.
Marine microorganisms are defined by their habitat as microorganisms living in a marine environment, that is, in the saltwater of a sea or ocean or the brackish water of a coastal estuary. A microorganism is any microscopic living organism or virus, that is too small to see with the unaided human eye without magnification. Microorganisms are very diverse. They can be single-celled or multicellular and include bacteria, archaea, viruses and most protozoa, as well as some fungi, algae, and animals, such as rotifers and copepods. Many macroscopic animals and plants have microscopic juvenile stages. Some microbiologists also classify biologically active entities such as viruses and viroids as microorganisms, but others consider these as non-living.
Ellobiopsis is a genus of unicellular, ectoparasitic eukaryotes causing disease in crustaceans. This genus is widespread and has been found infecting copepods from both marine and freshwater ecosystems. parasitism has been seen to interfere with fertility in both sexes of copepods.
Parvilucifera is a genus of marine alveolates that parasitise dinoflagellates. Parvilucifera is a parasitic genus described in 1999 by Norén et al. It is classified perkinsozoa in the supraphylum of Alveolates. This taxon serves as a sister taxon to the dinoflagellates and apicomplexans. Thus far, five species have been described in this taxon, which include: P.infectans, P.sinerae, P.corolla, P.rostrata, and P.prorocentri. The genus Parvilucifera is morphologically characterized by flagellated zoospore. The life cycle of the species in this genus consist of free-living zoospores, an intracellular stage called trophont, and asexual division to form resting sporangium inside host cell. This taxon has gained more interest in research due to its potential significance in terms of negative regulation for dinoflagellates blooms, that have proved harmful for algal species, humans, and the shellfish industry.
Blastodinium is a diverse genus of dinoflagellates and important parasites of planktonic copepods. They exist in either a parasitic stage, a trophont stage, and a dinospore stage. Although morphologically and functionally diverse, as parasites they live exclusively in the intestinal tract of copeods.
Coccidinium is a genus of parasitic syndinian dinoflagellates that infect the nucleus and cytoplasm of other marine dinoflagellates. Coccidinium, along with two other dinoflagellate genera, Amoebophyra and Duboscquella, contain species that are the primary endoparasites of marine dinoflagellates. While numerous studies have been conducted on the genus Amoebophyra, specifically Amoebophyra ceratii, little is known about Coccidinium. These microscopic organisms have gone relatively unstudied after the initial observations of Édouard Chatton and Berthe Biecheler in 1934 and 1936.
Ichthyodinium is a monotypic genus of dinoflagellates in the family Dinophysaceae. Ichthyodinium chabelardi (/ɪkθioʊˈdɪniəm/) is currently the sole described species of the genus.
Haplozoon (/hæploʊ’zoʊən/) are unicellular endo-parasites, primarily infecting maldanid polychaetes. They belong to Dinoflagellata but differ from typical dinoflagellates. Most dinoflagellates are free-living and possess two flagella. Instead, Haplozoon belong to a 5% minority of parasitic dinoflagellates that are not free-living. Additionally, the Haplozoon trophont stage is particularly unique due to an apparent lack of flagella. The presence of flagella or remnant structures is the subject of ongoing research.
Torodinium (ˌtɔɹoʊˈdɪniəm) is a genus of unarmored dinoflagellates and comprises two species, Torodinium robustum and the type species Torodinium teredo. The establishment of Torodinium, as well as the characterization of the majority of its morphology, occurred in 1921 and further advances since have been slow. Lack of research is largely due to its extremely fragile and easily deformed nature, which also renders fossil records implausible. The genus was originally characterized by torsion of the sulcus and a posterior cingulum. Since then, new distinctive features have been discovered including an extremely reduced hyposome, a longitudinally ribbed episome, and a canal on the dextro-lateral side. Further investigation into the function of many anatomical features is still necessary for this genus.
Colponema is a genus of single-celled flagellates that feed on eukaryotes in aquatic environments and soil. The genus contains 6 known species and has not been thoroughly studied. Colponema has two flagella which originate just below the anterior end of the cell. One extends forwards and the other runs through a deep groove in the surface and extends backwards. Colponema is a predator that feeds on smaller flagellates using its ventral groove. Like many other alveolates, they possess trichocysts, tubular mitochondrial cristae, and alveoli. It has been recently proposed that Colponema may be the sister group to all other alveolates. The genus could help us understand the origin of alveolates and shed light on features that are ancestral to all eukaryotes.
Marine protists are defined by their habitat as protists that live in marine environments, that is, in the saltwater of seas or oceans or the brackish water of coastal estuaries. Life originated as marine single-celled prokaryotes and later evolved into more complex eukaryotes. Eukaryotes are the more developed life forms known as plants, animals, fungi and protists. Protists are the eukaryotes that cannot be classified as plants, fungi or animals. They are mostly single-celled and microscopic. The term protist came into use historically as a term of convenience for eukaryotes that cannot be strictly classified as plants, animals or fungi. They are not a part of modern cladistics because they are paraphyletic.
